MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-204-P1b

Family name MIR-204 (all species)
Seed UCCCUUU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1b  Ebu-Mir-204  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1b  Xtr-Mir-204-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884906.1: 917162-917218 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUGGAGAGCUCCUCUGUGACCUGUGGGAUUCCCUUUGUCAUCCUAUGCCUGGAGCUCAAAUGAGGCAAGGACAGCAAAGGGGUGCUCAAUUGUCACCUCUGACUUCACUCCUUCC
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Structure
        10          20        30        40        50        
AGCUGGAGAGCUCCUCU--|    CUG    AU         CA    A     GGAGC 
                   GUGAC   UGGG  UCCCUUUGU  UCCU UGCCU     U
                   CACUG   ACUC  GGGGAAACG  AGGA ACGGA     C
CCUUCCUCACUUCAGUCUC^    UUA    GU         AC    -     GUAAA 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-204-P1b_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Mal-Mir-204-P1b_3p*
mirBase accessionNone
Sequence 
36- GCAAGGACAGCAAAGGGGUGC -57
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