MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-722-P2-v2

Family name MIR-722 (all species)
Seed UUGCAGA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-722-P1-v1  Mal-Mir-722-P1-v2  Mal-Mir-722-P2-v1 
Orthologues Dre-Mir-722-P2-v1  Dre-Mir-722-P2-v2  Gmo-Mir-722-P2-v1  Gmo-Mir-722-P2-v2  Lch-Mir-722  Tni-Mir-722-P2-v1  Tni-Mir-722-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Osteichthyes
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884893.1: 72790-72854 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGACACAAAAAGACUGGAAUAGAAUGGAAUUUGAAACGUUUUAGCCAAAAAUGUUUCCAUAGUCAAGGUGUUUUUUGCAGAAACGUUUCAGAUUUCGUUUUGUUCUCCAACUCCGUGGGUGAAG
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Structure
        10          20        30        40        50        60  
CAGACACAAAAAGACUG--|                         A  C    AUGUUUCCAU 
                   GAAUAGAAUGGAAUUUGAAACGUUUU GC AAAA          \
                   CUUGUUUUGCUUUAGACUUUGCAAAG CG UUUU          A
GAAGUGGGUGCCUCAACCU^                         A  U    UGUGGAACUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-722-P2-v2_5p*

mirBase accessionNone
Sequence
0- UUUGAAACGUUUUAGCCAAAA -21
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Mature sequence

Mal-Mir-722-P2-v2_3p

mirBase accessionNone
Sequence
44- UUUGCAGAAACGUUUCAGAUU -65
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