MirGeneDB ID | Mal-Mir-722-P2-v2 |
Family name |
MIR-722 (all species) |
Seed |
UUGCAGA |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
Mal-Mir-722-P1-v1
Mal-Mir-722-P1-v2
Mal-Mir-722-P2-v1
|
Orthologues |
Dre-Mir-722-P2-v1
Dre-Mir-722-P2-v2
Gmo-Mir-722-P2-v1
Gmo-Mir-722-P2-v2
Lch-Mir-722
Tni-Mir-722-P2-v1
Tni-Mir-722-P2-v2
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Osteichthyes
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884893.1: 72790-72854 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGACACAAAAAGACUGGAAUAGAAUGGAAUUUGAAACGUUUUAGCCAAAAAUGUUUCCAUAGUCAAGGUGUUUUUUGCAGAAACGUUUCAGAUUUCGUUUUGUUCUCCAACUCCGUGGGUGAAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAGACACAAAAAGACUG--| A C AUGUUUCCAU
GAAUAGAAUGGAAUUUGAAACGUUUU GC AAAA \
CUUGUUUUGCUUUAGACUUUGCAAAG CG UUUU A
GAAGUGGGUGCCUCAACCU^ A U UGUGGAACUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mal-Mir-722-P2-v2_5p* |
mirBase accession | None |
Sequence |
0- UUUGAAACGUUUUAGCCAAAA -21
Get sequence
|
Mature sequence |
Mal-Mir-722-P2-v2_3p |
mirBase accession | None |
Sequence |
44- UUUGCAGAAACGUUUCAGAUU -65
Get sequence
|