MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-726

Family name MIR-726 (all species)
Seed UCACUAC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-726  Cpi-Mir-726  Dre-Mir-726  Gga-Mir-726  Gja-Mir-726  Loc-Mir-726  Spt-Mir-726  Tgu-Mir-726  Tni-Mir-726  Xla-Mir-726-P1  Xla-Mir-726-P2  Xtr-Mir-726 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884706.1: 7540717-7540777 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGUUGCUGUGAUGUUCUGAGGGUAGGUCUGGAAUUCCGCUAGUUCUGAACUAUUCAUGUUUGGUAAAAGCUCACUACUAGCAGAACUCAGAUUUGCUCUUGACUACCGACGGGAAACUCU
Get precursor sequence
Structure
        10          20        30        40        50        60
GUGUUGCUGUGAUGUUCU--|             AA   C      UC   A  AUUCAUG 
                    GAGGGUAGGUCUGG  UUC GCUAGU  UGA CU       U
                    UUCUCGUUUAGACU  AAG CGAUCA  ACU GA       U
UCUCAAAGGGCAGCCAUCAG^             C-   A      UC   C  AAAUGGU 
 .       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-726_5p*

mirBase accessionNone
Sequence
0- GGAAUUCCGCUAGUUCUGAACU -22
Get sequence
Mature sequence

Mal-Mir-726_3p

mirBase accessionNone
Sequence
40- CUCACUACUAGCAGAACUCAG -61
Get sequence