MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-1298

Family name MIR-1298 (all species)
Seed UCAUUCG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-1298
Paralogues
Orthologues Bta-Mir-1298  Cfa-Mir-1298  Cja-Mir-1298  Cpo-Mir-1298  Eca-Mir-1298  Ete-Mir-1298  Hsa-Mir-1298  Laf-Mir-1298  Mmr-Mir-1298  Mmu-Mir-1298  Ocu-Mir-1298  Pab-Mir-1298  Rno-Mir-1298 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014356.1: 111265944-111266019 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1298)
Mir-1298 CM014356.1: 111265944-111266019 [+] UCSC Ensembl
Mir-1911 CM014356.1: 111300398-111300456 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAGCUGUUGGAGAGACGAGGAGUUAAGAGUUCAUUCGGCUGUCCAGAUGUAUCCAAGUAUCCUCUGUUAUUUGGCAAUAAAUACAUCUGGGCAACUGACUGAACUUUUCGCUUUUCAUGACUCAGCUGGAACCCU
Get precursor sequence
Structure
        10          20        30        40        50        60       
AGAGCUGUUGGAGAGAC--|      U         U    C            UCCAAGUAUCCUCU 
                   GAGGAGU AAGAGUUCA UCGG UGUCCAGAUGUA              G
                   CUUUUCG UUUUCAAGU AGUC ACGGGUCUACAU              U
UCCCAAGGUCGACUCAGUA^      C         C    A            AAAUAACGGUUUAU 
    130       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-1298_5p

mirBase accessionMIMAT0024316
Sequence
0- UUCAUUCGGCUGUCCAGAUGUA -22
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Proposed targets TargetScanVert: mml-miR-1298-5p
Star sequence

Mml-Mir-1298_3p*

mirBase accessionMIMAT0027109
Sequence
54- CAUCUGGGCAACUGACUGAACU -76
Get sequence
Proposed targets TargetScanVert: mml-miR-1298-3p