MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-488

Family name MIR-488 (all species)
Seed UGAAAGG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-488
Paralogues
Orthologues Bta-Mir-488  Cfa-Mir-488  Dno-Mir-488  Ete-Mir-488  Hsa-Mir-488  Mmu-Mir-488  Ocu-Mir-488  Rno-Mir-488 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chr1: 190531979-190532037 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAGUGGAAAAUUUCAGAGAAUCAUCUCUCCCAGAUAAUGGCACUCUCAAACAAGUUUCCAAGUUGUUUGAAAGGCUAUUUCUUGGUCAGAUGACUCUCAAUUUCUUCUGGAAGACUC
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Structure
        10          20        30        40        50          
UAGAGUGGAAAAUUUCA--|   A      CU  C   U      A  C      AAGUUU 
                   GAGA UCAUCU  CC AGA AAUGGC CU UCAAAC      \
                   CUCU AGUAGA  GG UCU UUAUCG GA AGUUUG      C
CUCAGAAGGUCUUCUUUAA^   C      CU  U   -      -  A      UUGAAC 
       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-488_5p*

mirBase accessionMIMAT0026882
Sequence
0- CCCAGAUAAUGGCACUCUCAAAC -23
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Proposed targets TargetScanVert: mml-miR-488-5p
Mature sequence

Mml-Mir-488_3p

mirBase accessionMIMAT0006348
Sequence
38- UUGAAAGGCUAUUUCUUGGUC -59
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Proposed targets TargetScanVert: mml-miR-488-3p