MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-598

Family name MIR-598 (all species)
Seed ACGUCAU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-598
Paralogues
Orthologues Cja-Mir-598  Cpo-Mir-598  Ete-Mir-598  Hsa-Mir-598  Laf-Mir-598  Mmr-Mir-598  Mmu-Mir-598  Pab-Mir-598  Rno-Mir-598-P1  Rno-Mir-598-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014343.1: 9544477-9544535 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAUGGCUUGAUGAUGCUGCUGAUGCUGGCGGUGAUCCCGAUGGUGUGAGCUGGAAAUGGGGUGCUACGUCAUCGUUGUCAUCGUCAUCAUCAUCAUCCGAGCAGCCACCAGAUAGC
Get precursor sequence
Structure
        10          20        30        40        50         
GAAGAUGGCUUGAUGAUGC--| C     C          CC     GU  G   UGGAA 
                     UG UGAUG UGGCGGUGAU  CGAUG  GU AGC     A
                     AC ACUAC ACUGCUACUG  GCUAC  CA UCG     U
CGAUAGACCACCGACGAGCCU^ U     U          UU     UG  -   UGGGG 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-598_5p*

mirBase accessionMIMAT0026902
Sequence
0- GCGGUGAUCCCGAUGGUGUGAGC -23
Get sequence
Proposed targets TargetScanVert: mml-miR-598-5p
Mature sequence

Mml-Mir-598_3p

mirBase accessionMIMAT0006455
Sequence
37- UACGUCAUCGUUGUCAUCGUCA -59
Get sequence
Proposed targets TargetScanVert: mml-miR-598-3p