MirGeneDB ID | Mml-Mir-598 |
Family name |
MIR-598 (all species) |
Seed |
ACGUCAU |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-598
|
Paralogues |
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Orthologues |
Cja-Mir-598
Cpo-Mir-598
Ete-Mir-598
Hsa-Mir-598
Laf-Mir-598
Mmr-Mir-598
Mmu-Mir-598
Pab-Mir-598
Rno-Mir-598-P1
Rno-Mir-598-P2
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014343.1: 9544477-9544535 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
GAAGAUGGCUUGAUGAUGCUGCUGAUGCUGGCGGUGAUCCCGAUGGUGUGAGCUGGAAAUGGGGUGCUACGUCAUCGUUGUCAUCGUCAUCAUCAUCAUCCGAGCAGCCACCAGAUAGC
Get precursor sequence
|
Structure | 10 20 30 40 50
GAAGAUGGCUUGAUGAUGC--| C C CC GU G UGGAA
UG UGAUG UGGCGGUGAU CGAUG GU AGC A
AC ACUAC ACUGCUACUG GCUAC CA UCG U
CGAUAGACCACCGACGAGCCU^ U U UU UG - UGGGG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-598_5p* |
mirBase accession | MIMAT0026902 |
Sequence |
0- GCGGUGAUCCCGAUGGUGUGAGC -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-598-5p
|
Mature sequence |
Mml-Mir-598_3p |
mirBase accession | MIMAT0006455 |
Sequence |
37- UACGUCAUCGUUGUCAUCGUCA -59
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-598-3p
|