MirGeneDB ID | Mml-Mir-675 |
Family name |
MIR-675 (all species) |
Seed |
UGUAUGC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-675
|
Paralogues |
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Orthologues |
Cfa-Mir-675
Cja-Mir-675
Cpo-Mir-675
Dno-Mir-675
Eca-Mir-675
Hsa-Mir-675
Laf-Mir-675
Mmr-Mir-675
Mmu-Mir-675
Neu-Mir-675
Pab-Mir-675
Rno-Mir-675
Sha-Mir-675
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014349.1: 2073175-2073231 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGUUCCCACGAGGCACUGCGGCCCAGGGUCUGGUGCGGAGAGGGCCCACAGUGGACUUGGUGACACUGUAUGCCCUCACCGCUCAGCCCCUGGGGCUGGCUUGGCAGGCAGUACAGC
Get precursor sequence
|
Structure | 10 20 30 40 50
CGUUCCCACGAGGCACUG- -| U U A CC GACU
CGG CCCAGGG CUGG GCGG GAGGGC ACAGUG U
GUC GGGUCCC GACU CGCC CUCCCG UGUCAC G
CGACAUGACGGACGGUUCG G^ C - A UA AGUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-675_5p* |
mirBase accession | MIMAT0006507 |
Sequence |
0- UGGUGCGGAGAGGGCCCACAGUG -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-675-5p
|
Mature sequence |
Mml-Mir-675_3p |
mirBase accession | MIMAT0026908 |
Sequence |
35- CUGUAUGCCCUCACCGCUCAGC -57
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-675-3p
|