Mir-192-P1

MirGeneDB ID

Mmu-Mir-192-P1

Family name

MIR-192 (all species)

Seed

UGACCUA

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-215

Paralogues

Mmu-Mir-192-P2

Orthologues

Aca-Mir-192-P1 Ami-Mir-192-P1 Bta-Mir-192-P1 Cfa-Mir-192-P1 Cli-Mir-192-P1 Cmi-Mir-192-P1 Cpi-Mir-192-P1 Cpo-Mir-192-P1 Dno-Mir-192-P1 Ebu-Mir-192-o1 Ete-Mir-192-P1 Gga-Mir-192-P1 Gja-Mir-192-P1 Hsa-Mir-192-P1 Lch-Mir-192-P1 Mdo-Mir-192-P1 Mml-Mir-192-P1 Mun-Mir-192-P1 Oan-Mir-192-P1 Oan-Mir-192-P1-as Ocu-Mir-192-P1 Pbv-Mir-192-P1 Pma-Mir-192-o1 Rno-Mir-192-P1 Spt-Mir-192-P1 Sto-Mir-192-P1 Tgu-Mir-192-P1 Xla-Mir-192-P1a Xla-Mir-192-P1b Xtr-Mir-192-P1

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(mm10)

chr1: 185313610-185313668 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-192-P1)

Mir-194-P1 chr1: 185313325-185313381 [+] UCSC Ensembl
Mir-192-P1 chr1: 185313610-185313668 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GAGCUCUCAGCAUCAACGGUGUACAGGAGAAUGACCUAUGAUUUGACAGACCGUGCAGCUGUGUAUGUCUGUCAUUCUGUAGGCCAAUAUUCUGUAUGUCACUGCUACUUAAAAUCCGG

Get precursor sequence

Structure

        10          20        30         40        50         
GAGCUCUCAGCAUCAAC-- GU        GAA  A     -| UU        CGUGCAG 
                   G  GUACAGGA   UG CCUAU GA  UGACAGAC       \
                   C  UAUGUCUU   AC GGAUG CU  ACUGUCUG       C
GGCCUAAAAUUCAUCGUCA UG        AUA  C     U^ U-        UAUGUGU 
       110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

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Mature sequence

Mmu-Mir-192-P1_5p

mirBase accession

MIMAT0000904

Sequence

0- AUGACCUAUGAUUUGACAGACC -22

Get sequence

Proposed targets

microrna.org: MIMAT0000904
TargetScanVert: mmu-miR-215-5p
miRDB: MIMAT0000904

Star sequence

Mmu-Mir-192-P1_3p*

mirBase accession

MIMAT0017169

Sequence

37- UCUGUCAUUCUGUAGGCCAAUA -59

Get sequence

Proposed targets

TargetScanVert: mmu-miR-215-3p
miRDB: MIMAT0017169