MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-339

Family name MIR-339 (all species)
Seed CCCUGUC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-339
Paralogues
Orthologues Bta-Mir-339  Cfa-Mir-339  Cpo-Mir-339  Dno-Mir-339  Ete-Mir-339  Hsa-Mir-339  Mml-Mir-339  Ocu-Mir-339  Rno-Mir-339 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr5: 139369673-139369730 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGUGCAGAGCUGGACGGGGUGGCCACUAUCCCUGUCCUCCAGGAGCUCACGUAUGCCUGCCUGUGAGCGCCUCGGCGACAGAGCCGGUGUCCACCCCUGCACUGUCCACAGACCCU
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Structure
        10          20        30        40         50        
GCUGUGCAGAGCUGGAC--|      C    AUCC     CU  -   A       UAUG 
                   GGGGUGG CACU    CUGUC  CC AGG GCUCACG    C
                   CCCCACC GUGG    GACAG  GG UCC CGAGUGU    C
UCCCAGACACCUGUCACGU^      U    CCGA     C-  C   G       CCGU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
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Mature sequence

Mmu-Mir-339_5p
mirBase accessionMIMAT0000584
Sequence 
0- UCCCUGUCCUCCAGGAGCUCACG -23
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Proposed targets microrna.org: MIMAT0000584
TargetScanVert: mmu-miR-339-5p
miRDB: MIMAT0000584
Star sequence

Mmu-Mir-339_3p*
mirBase accessionMIMAT0004649
Sequence 
35- UGAGCGCCUCGGCGACAGAGCCG -58
Get sequence
Proposed targets microrna.org: MIMAT0004649
TargetScanVert: mmu-miR-339-3p
miRDB: MIMAT0004649