Mir-652

MirGeneDB ID

Mmu-Mir-652

Family name

MIR-652 (all species)

Seed

AUGGCGC

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-652

Paralogues

Orthologues

Bta-Mir-652 Cfa-Mir-652 Cpo-Mir-652 Dno-Mir-652 Ete-Mir-652 Hsa-Mir-652 Mml-Mir-652 Ocu-Mir-652 Rno-Mir-652

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(mm10)

chrX: 142739020-142739080 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAGGGCCUCCAGGAACAGCUAUGUACUGCACAACCCUAGGAGGGGGUGCCAUUCACAUAGAGUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGUACAGCCUACACAACUCUACGCGGC

Get precursor sequence

Structure

        10          20        30        40        50        60  
AAGGGCCUCCAGGAACA--|  A                  GAGGG           CAUAGA 
                   GCU UGUACUGCACAACCCUAG     GGUGCCAUUCA      \
                   CGA AUGUGACGUGUUGGGAUC     CCGCGGUAAGU      G
CGGCGCAUCUCAACACAUC^  C                  A----           UAAUAU 
 .       110       100        90        80            70

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt

Star sequence

Mmu-Mir-652_5p*

mirBase accession

MIMAT0017260

Sequence

0- CAACCCUAGGAGGGGGUGCCAUUCA -25

Get sequence

Proposed targets

TargetScanVert: mmu-miR-652-5p
miRDB: MIMAT0017260

Mature sequence

Mmu-Mir-652_3p

mirBase accession

MIMAT0003711

Sequence

40- AAUGGCGCCACUAGGGUUGUG -61

Get sequence

Proposed targets

microrna.org: MIMAT0003711
TargetScanVert: mmu-miR-652-3p
miRDB: MIMAT0003711