MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-103-P4

Family name MIR-103 (all species)
Seed GCAGCAU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-103-P1  Mun-Mir-103-P2 
Orthologues Aca-Mir-103-P4  Ami-Mir-103-P4  Bta-Mir-103-P4  Cfa-Mir-103-P4  Cli-Mir-103-P4  Cmi-Mir-103-P4  Cpi-Mir-103-P4  Cpo-Mir-103-P4  Dno-Mir-103-P4  Ete-Mir-103-P4  Gga-Mir-103-P4  Gja-Mir-103-P4  Hsa-Mir-103-P4  Lch-Mir-103-P4  Loc-Mir-103-P4  Mdo-Mir-103-P4  Mml-Mir-103-P4  Mmu-Mir-103-P4  Oan-Mir-103-P4  Ocu-Mir-103-P4  Pbv-Mir-103-P4  Pfl-Mir-103  Pmi-Mir-103  Rno-Mir-103-P4  Sha-Mir-103-P4  Sko-Mir-103  Spt-Mir-103-P4  Spu-Mir-103  Sto-Mir-103-P4  Tgu-Mir-103-P4  Xbo-Mir-103  Xla-Mir-103-P4  Xtr-Mir-103-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Deuterostomia
Genome context
(Mun_miRNA_loci)
103-P3_LR594636.1:83663042-83663301: 101-160 [+]
Precursor
(pre-Mir +30nt flank)
AUUUGCAGGAUUCACAUUCUCUCUGCUUUCAGCUUCUUUACAGUGUUGGGUUGUGGCAUGGAAUUCAAGCAGCAUUGUACAGGGCUAUCAAAGCACUGAGAACUGCUUCGCAAGGUCUUG
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Structure
        10          20        30          40        50         
AUUUGCAGGAUUCACAU--    UC      C--|   U  U          GG   UGGCA 
                   UCUC  UGCUUU   AGCU CU UACAGUGUUG  UUG     U
                   AGAG  ACGAAA   UCGG GA AUGUUACGAC  AAC     G
GUUCUGGAACGCUUCGUCA    UC      CUA^   -  C          G-   UUAAG 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Mun-Mir-103-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- AGCUUCUUUACAGUGUUGGGUUG -23
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Mature sequence

Mun-Mir-103-P4_3p

mirBase accessionNone
Sequence
37- AGCAGCAUUGUACAGGGCUAUCA -60
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