MirGeneDB ID | Mun-Mir-194-P1 |
Family name |
MIR-194 (all species) |
Seed |
GUAACAG |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
Mun-Mir-194-P2
|
Orthologues |
Aca-Mir-194-P1
Ami-Mir-194-P1
Bta-Mir-194-P1
Cfa-Mir-194-P1
Cli-Mir-194-P1
Cmi-Mir-194-P1
Cpi-Mir-194-P1
Ebu-Mir-194-o1
Ete-Mir-194-P1
Gga-Mir-194-P1
Gja-Mir-194-P1
Hsa-Mir-194-P1
Lch-Mir-194-P1
Mml-Mir-194-P1
Mmu-Mir-194-P1
Oan-Mir-194-P1
Ocu-Mir-194-P1
Pbv-Mir-194-P1
Pma-Mir-194-o1
Rno-Mir-194-P1
Spt-Mir-194-P1
Sto-Mir-194-P1
Tgu-Mir-194-P1
Xla-Mir-194-P1a
Xla-Mir-194-P1b
Xtr-Mir-194-P1
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (Mun_miRNA_loci) |
194-P2_LR594634.1:64266467-64266722: 101-156 [+]
|
Precursor (pre-Mir +30nt flank) |
CAUUCCAACAGUUCAGCGGUGUGUAUCAGGUGUAACAGCAACUCCAUGUGGACUGUAAUAGUUUCCAGUGGAGAUGCUGUUACUUUUGAUGGGCACUUACAAAUCAAGAGCAGCUA
Get precursor sequence
|
Structure | 10 20 30 40 50
CAUUCCAACAGUUCAGC--| G U A G CUGUA
GGUGU UAUCAGG GUAACAGCA CUCCAU UGGA \
UCACG GUAGUUU CAUUGUCGU GAGGUG ACCU A
AUCGACGAGAACUAAACAU^ G U A - UUGAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UGUG in loop |
Tissue expression
|
|
Mature sequence |
Mun-Mir-194-P1_5p |
mirBase accession | None |
Sequence |
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
|
Star sequence |
Mun-Mir-194-P1_3p* |
mirBase accession | None |
Sequence |
34- CCAGUGGAGAUGCUGUUACUUU -56
Get sequence
|