MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-194-P1 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cpi-Mir-194-P2  Cpo-Mir-194-P2  Dno-Mir-194-P2  Dre-Mir-194-P2a  Dre-Mir-194-P2b  Ete-Mir-194-P2  Gja-Mir-194-P2  Gmo-Mir-194-P2a  Gmo-Mir-194-P2b  Hsa-Mir-194-P2  Lch-Mir-194-P2  Loc-Mir-194-P2  Mal-Mir-194-P2a  Mal-Mir-194-P2b  Mml-Mir-194-P2  Mmu-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Sha-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tni-Mir-194-P2a  Tni-Mir-194-P2b  Xla-Mir-194-P2c  Xla-Mir-194-P2d  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)
194-P1_LR594642.1:122927547-122927691: 45-101 [-]
Precursor
(pre-Mir +30nt flank)
UAUCCACUACUUAUCUCAGUGUCUAUUGCAUGUAACAGCAACUCCAUGUGGAAGGGUCUGUGUUUCCAGUGGAGCUGCUGUUAUUAUCCAUGGGCACCUAUGGACGACCCGAGAGAA
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Structure
        10          20        30        40        50        
UAUCCACUACUUAUCUCA--|       UGCAU         A      G     GGGU 
                    GUGUCUAU     GUAACAGCA CUCCAU UGGAA    C
                    CACGGGUA     UAUUGUCGU GAGGUG ACCUU    U
AAGAGAGCCCAGCAGGUAUC^       CCUAU         C      -     UGUG 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Mun-Mir-194-P2_5p

mirBase accessionNone
Sequence
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Mun-Mir-194-P2_3p*

mirBase accessionNone
Sequence
35- CCAGUGGAGCUGCUGUUAUUAU -57
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