| MirGeneDB ID | Nve-Mir-9424-P1 |
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| Family name |
MIR-9424 (all species) |
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| Seed |
AAAGCUG |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-9424b
|
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| Paralogues |
Nve-Mir-9424-P2
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| Orthologues |
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| Node of Origin (locus) |
N. vectensis
|
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| Node of Origin (family) |
N. vectensis
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Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001833008.1: 5527-5578 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAGUCUUGGACAUACCGUCAUUUAAGACUGCCUCGAUGAGCCAACUAUACAGAUAUCUGUAAAGCUGGUUUAUCGAGGCAGUCUUUAAGGACGGUGUCUGAUGAGCUUGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAGUCUUGGACAUACC--| AUUU A A GA
GUC AAGACUGCCUCGAUGAGCCA CU UACA U
CAG UUCUGACGGAGCUAUUUGGU GA AUGU A
ACGUUCGAGUAGUCUGUGG^ GAAU C A CU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Nve-Mir-9424-P1_5p* |
| mirBase accession | None |
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| Sequence |
0- GCCUCGAUGAGCCAACUAUACA -22
Get sequence
|
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| Mature sequence |
Nve-Mir-9424-P1_3p |
| mirBase accession | MIMAT0035392 |
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| Sequence |
30- UAAAGCUGGUUUAUCGAGGCAG -52
Get sequence
|
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