MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-1390

Family name MIR-1390 (all species)
Seed GCACACU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-1390
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041728.1: 138347837-138347896 [-]
Precursor
(pre-Mir +30nt flank)
AAUAAAUCAGUGCAUCUGAAUAUAAAGGGAUAUACAGAUUCGAGUAUGCAUAUGUAAUAUACUCUAUGUGCACACUCAUAUCUGUAUAACCCUAUAUAUUCAUAUAUAUUGUAUAUAUUC
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Structure
        10          20        30        40        50         
AAUAAAUCAGUGCAUCU--|      A    A         UC    A     AUGUAAU 
                   GAAUAUA AGGG UAUACAGAU  GAGU UGCAU       A
                   CUUAUAU UCCC AUAUGUCUA  CUCA ACGUG       U
CUUAUAUAUGUUAUAUAUA^      A    A         UA    C     UAUCUCA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-1390_5p*

mirBase accessionMIMAT0007176
Sequence
0- UAUACAGAUUCGAGUAUGCAU -21
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Mature sequence

Oan-Mir-1390_3p

mirBase accessionMIMAT0007177
Sequence
38- UGCACACUCAUAUCUGUAUAAC -60
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