| MirGeneDB ID | Oan-Novel-11 |
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| Family name |
OAN-NOVEL-11 (all species) |
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| Seed |
CUACCCA |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041742.1: 17791886-17791945 [+]
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Precursor
(pre-Mir +30nt flank) |
UAUACUGCAACAGACAAGGUAGACACGAUUUCUACCCACAAGGAACUUAGGGUCUCUCCCAUGUUAUCUUAAGUUCUUUGAGGACAGGGAUCGUGUCUACUACUACUGAUGGUAGUAUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUACUGCAACAGACAA--| UU AC A UCUCUC
GGUAGACACGAU CU CC CAAGGAACUUAGGG C
UCAUCUGUGCUA GA GG GUUUCUUGAAUUCU C
UUUAUGAUGGUAGUCAUCA^ GG CA A AUUGUA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Oan-Novel-11_5p |
| mirBase accession | None |
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| Sequence |
0- UCUACCCACAAGGAACUUAGGG -22
Get sequence
|
|---|
| Star sequence |
Oan-Novel-11_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- UUAAGUUCUUUGAGGACAGGGA -60
Get sequence
|
|---|
