MirGeneDB 2.1

MirGeneDB ID

Oan-Novel-6

Family name OAN-NOVEL-6 (all species)
Seed AGUAAAG
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041729.1: 49166166-49166232 [-]
Precursor
(pre-Mir +30nt flank)
AGUUGAGGCCCAGAGAGGUUGAGUGCUUGCUCCGUGCAGAGCACUAUACUAAGUGUACCAUACAACCCAAAGCUUAGUAAAGUACUCUGCGCAUGGUAAGCGCUCAAUAAAUGCCACUGAUGGAUGU
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Structure
        10          20        30        40        50        60   
AGUUGAGGCCCAGAGAG--|             CC        C   A       UGUACCAUA 
                   GUUGAGUGCUUGCU  GUGCAGAG ACU UACUAAG         \
                   UAACUCGCGAAUGG  CGCGUCUC UGA AUGAUUC         C
UGUAGGUAGUCACCGUAAA^             UA        A   A       GAAACCCAA 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Novel-6_5p*

mirBase accessionNone
Sequence
0- UCCGUGCAGAGCACUAUACUAAG -23
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Mature sequence

Oan-Novel-6_3p

mirBase accessionNone
Sequence
44- UAGUAAAGUACUCUGCGCAUGGU -67
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