| MirGeneDB ID | Obi-Mir-12522-v2 |
|---|
| Family name |
MIR-12522 (all species) |
|---|
| Seed |
UUUAAGA |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Mir-12522-v1
|
|---|
| Orthologues |
Esc-Mir-12522-v2
Ovu-Mir-12522-v2
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ415759: 381807-381864 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUUCUCAGAAGAUCGAGGACUCCUGUACCCCGUGUAACAGUUCUGAGACCUAGAAUAUAAGACGAGGUUUAAGACUGUCCCACGGGCUAAAGGAAUCUAUUUAGCAGCACGAGACCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUUCUCAGAAGAUCGA--| C G C UA U G AGAAUA
GGA UCCU UA CCCGUG ACAGU CU AGACCU \
UCU AGGA AU GGGCAC UGUCA GA UUUGGA U
UCCAGAGCACGACGAUUUA^ A A C CC - A GCAGAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Mir-12522-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCGUGUAACAGUUCUGAGACCU -22
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12522-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- GUUUAAGACUGUCCCACGGGC -58
Get sequence
|
|---|
