| MirGeneDB ID | Obi-Mir-12573 |
|---|
| Family name |
MIR-12573 (all species) |
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| Seed |
GAACAUU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12573
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ416716: 275878-275933 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UAUGGCAAAGGUAUUGCACAUCAGUCUAGCUGAACAUUCUCUAAGAACACUAUAUUAAAAUGUGGUAUUCUUGGAGAAUGUUCAGCUUGACUGAUAGUACUUAUUGGAAGGAAGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUGGCAAAGGUAUUGC- -| U C AUAUU
AC AUCAGUC AGCUGAACAUUCUCUAAGAA ACU A
UG UAGUCAG UCGACUUGUAAGAGGUUCUU UGG A
AAGAAGGAAGGUUAUUCA A^ U A UGUAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12573_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAACAUUCUCUAAGAACACU -21
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12573_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- UAUUCUUGGAGAAUGUUCAGC -56
Get sequence
|
|---|
