| MirGeneDB ID | Obi-Mir-12585 |
|---|
| Family name |
MIR-12585 (all species) |
|---|
| Seed |
CUGCUGA |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Ovu-Mir-12585
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ420605: 265986-266047 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCGUUUAAGUUGUAUUCCUGGUAAAUAAACUCUGCUGAUUCCUUACGAAGCCUCCAUAGUUCCAGUUGGGGCUCGUGGGUUAACAACAGAGUUUUUUUCUGCCAGAAUAUGAAGACAACUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCGUUUAAGUUGUAUUCC AAU--| C AUUC A CCAUAGU
UGGUA AAACUCUG UG CUUACGA GCCU \
ACCGU UUUGAGAC AC GGGUGCU CGGG U
UUUCAACAGAAGUAUAAG CUUUU^ A AAUU - GUUGACC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Mir-12585_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGCUGAUUCCUUACGAAGCCU -23
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12585_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- GCUCGUGGGUUAACAACAGAGU -62
Get sequence
|
|---|
