MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-11

Family name CEP-NOVEL-11 (all species)
Seed GGUUUUG
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Npo-Novel-11  Ovu-Novel-11 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(PRJNA270931_OBI)
KQ419141: 196735-196794 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGAUAAUGUGAGCUUUGCCCCAGUGGAGCUGGUUUUGUGAGAUGUUCAUUGGUUACAUAAAAUAUUCAGUGACCAUCUCUAAAACUAACUUUCCUGGUGGUCAUAACAACUUCAUACAC
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Structure
        10         20         30        40        50          
UCGAUAAUGUGAGCUUU-   -|   UG   C        U      U       UUACAU 
                  GCC CCAG  GAG UGGUUUUG GAGAUG UCAUUGG      \
                  UGG GGUC  UUC AUCAAAAU CUCUAC AGUGACU      A
CACAUACUUCAACAAUAC   U^   CU   A        -      C       UAUAAA 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Novel-11_5p

mirBase accessionNone
Sequence
0- UGGUUUUGUGAGAUGUUCAUUGG -23
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Star sequence

Obi-Novel-11_3p*

mirBase accessionNone
Sequence
38- AGUGACCAUCUCUAAAACUAAC -60
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