MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-27

Family name COL-NOVEL-27 (all species)
Seed CAUCCAC
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Novel-27  Ovu-Novel-27 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ422919: 914604-914672 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUACUUUGGAGUUUUUGUGUGUGGUGCACACAUCCACAUGUUGUUGACUUGCCAAUUUCCCCUUCUCACAGUACCGAGUCAACAACUUGUGGAUGUGUACAAAACAGACUCAUUGCAACAUAUGAAGU
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Structure
        10          20        30        40        50        60    
GAUACUUUGGAGUUUUU--| G   GG  C           U            CCAAUUUCCCC 
                   GU UGU  UG ACACAUCCACA GUUGUUGACUUG           \
                   CA ACA  AC UGUGUAGGUGU CAACAACUGAGC           U
UGAAGUAUACAACGUUACU^ G   AA  A           U            CAUGACACUCU 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Novel-27_5p

mirBase accessionNone
Sequence
0- ACAUCCACAUGUUGUUGACUUG -22
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Star sequence

Obi-Novel-27_3p*

mirBase accessionNone
Sequence
47- AGUCAACAACUUGUGGAUGUGU -69
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