MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-91

Family name OCT-NOVEL-91 (all species)
Seed UGUGUCU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) O. bimaculoides
Node of Origin (family) O. bimaculoides
Genome context
(PRJNA270931_OBI)
KQ418023: 53012-53069 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGUGUUUUGAAACUUGUUGCUCUCAUUGUUGUGUCUAUUGCUAAGCUAUGUUUGCCUAGUCCACUUAGCUGUAAAUAGGCACAAUGUGGAAGGAACAACUCACUACUCUCAGUUGC
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Structure
        10           20        30        40        50         
CUGGUGUUUUGAAACUU---|  G  CU   U            GCUA     U  UUGCC 
                    GUU CU  CAU GUUGUGUCUAUU    AGCUA GU     \
                    CAA GA  GUG UAACACGGAUAA    UCGAU CA     U
CGUUGACUCUCAUCACUCAA^  G  AG   -            AUG-     U  CCUGA 
      110       100        90         80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Novel-91_5p

mirBase accessionNone
Sequence
0- UUGUGUCUAUUGCUAAGCUAUGU -23
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Star sequence

Obi-Novel-91_3p*

mirBase accessionNone
Sequence
36- UUAGCUGUAAAUAGGCACAAUG -58
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