MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-154-P4-o1

Family name MIR-154 (all species)
Seed ACACACC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-329
Paralogues Ocu-Mir-154-P1  Ocu-Mir-154-P2-v1  Ocu-Mir-154-P2-v2  Ocu-Mir-154-P3a-v1  Ocu-Mir-154-P3a-v2  Ocu-Mir-154-P5  Ocu-Mir-154-P6  Ocu-Mir-154-P7  Ocu-Mir-154-P9  Ocu-Mir-154-P10  Ocu-Mir-154-P12  Ocu-Mir-154-P13  Ocu-Mir-154-P15  Ocu-Mir-154-P16  Ocu-Mir-154-P17  Ocu-Mir-154-P19  Ocu-Mir-154-P20-v1  Ocu-Mir-154-P20-v2  Ocu-Mir-154-P21  Ocu-Mir-154-P22  Ocu-Mir-154-P23  Ocu-Mir-154-P24  Ocu-Mir-154-P25  Ocu-Mir-154-P26  Ocu-Mir-154-P27  Ocu-Mir-154-P30  Ocu-Mir-154-P36 
Orthologues Bta-Mir-154-P4a  Bta-Mir-154-P4b  Cfa-Mir-154-P4a  Cfa-Mir-154-P4b  Cpo-Mir-154-P4-o1  Dno-Mir-154-P4a  Dno-Mir-154-P4b  Ete-Mir-154-P4a  Ete-Mir-154-P4b  Hsa-Mir-154-P4a  Hsa-Mir-154-P4b  Mml-Mir-154-P4a  Mml-Mir-154-P4b  Mmu-Mir-154-P4-o1  Rno-Mir-154-P4-o1 
Node of Origin (locus) Glires
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
Precursor
(pre-Mir +30nt flank)
AGAGGUUUUCUGGGUUUCUGUUUCUUGGAUGAGGAUGAAACACACCUGGUUAGCCUCUUU
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Structure
          10        20        30
--|      UU UG   UUC      UUGGA 
  AGAGGUU  C  GGU   UGUUUC     U
  UCUCCGA  G  CCA   ACAAAG     G
UU^      UU GU   C--      UAGGA 
.        50          40
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Ocu-Mir-154-P4-o1_5p* (predicted)
mirBase accessionMIMAT0048378
Sequence 
0- AGAGGUUUUCUGGGUUUCUGUUU -23
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Mature sequence

Ocu-Mir-154-P4-o1_3p
mirBase accessionMIMAT0048379
Sequence 
38- AACACACCUGGUUAGCCUCUUU -60
Get sequence