| MirGeneDB ID | Ovu-Novel-23 |
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| Family name |
COL-NOVEL-23 (all species) |
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| Seed |
CCUUGAU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-23
Obi-Novel-23
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01013432.1: 1000867-1000922 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUUGUUGCUUUGAGGAAGGUUCGGUUCGAUCCCUUGAUUUCUCUGCCACUCCGUGAUUAGCUGAAGUGUCUGAGGAAUCAUGAGAGCGAACCAAUCACAGGUCUUCAGCAUCCACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUUGUUGCUUUGAGGAA---| C A CCU UGC C GUGA
GGUU GGUUCG UC UGAUUUCUC CACU C U
CUAA CCAAGC AG ACUAAGGAG GUGA G U
UCACCUACGACUUCUGGACA^ - G AGU UCU A UCGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
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| Mature sequence |
Ovu-Novel-23_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CCCUUGAUUUCUCUGCCACUCC -22
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-23_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- AGUGUCUGAGGAAUCAUGAGAG -56
Get sequence
|
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