| MirGeneDB ID | Ovu-Novel-50 |
|---|
| Family name |
COL-NOVEL-50 (all species) |
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| Seed |
GUCUCAU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-50
Obi-Novel-50
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01012780.1: 914-971 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAUAAAGAUAUCACUCAUGCUGAUUUCUAUAGUCUCAUGUAUUGGAAUGUUGCCUCUAUUUUACCAACAUUCCAGUGCAUGAGUCAUAGAGAACAGUACAAGGCAUCAUAAUAGUCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUAAAGAUAUCACUCA---| A AGU CCUCU
UGCUG UUUCUAU CUCAUGUAUUGGAAUGUUG A
AUGAC AGAGAUA GAGUACGUGACCUUACAAC U
AACUGAUAAUACUACGGAAC^ A CU- CAUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
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| Mature sequence |
Ovu-Novel-50_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUCUCAUGUAUUGGAAUGUUG -22
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-50_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- ACAUUCCAGUGCAUGAGUCAUA -58
Get sequence
|
|---|
