MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-1388

Family name MIR-1388 (all species)
Seed GGACUGU
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-1388
Paralogues
Orthologues Aca-Mir-1388  Ami-Mir-1388  Bta-Mir-1388  Cfa-Mir-1388  Cli-Mir-1388  Cmi-Mir-1388  Cpi-Mir-1388  Cpo-Mir-1388  Dno-Mir-1388  Dre-Mir-1388  Eca-Mir-1388  Eca-Mir-1388-as  Ete-Mir-1388  Gga-Mir-1388  Gja-Mir-1388  Gmo-Mir-1388  Laf-Mir-1388  Lch-Mir-1388  Loc-Mir-1388  Mal-Mir-1388  Mdo-Mir-1388  Mmr-Mir-1388  Mun-Mir-1388  Oan-Mir-1388-v1  Oan-Mir-1388-v2  Sha-Mir-1388  Spt-Mir-1388  Sto-Mir-1388  Tgu-Mir-1388  Tni-Mir-1388  Xla-Mir-1388-P1  Xla-Mir-1388-P2  Xtr-Mir-1388 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE954591.1: 217186-217246 [-]
Precursor
(pre-Mir +30nt flank)
CGGGCAGAUGACAAGCUGAGGAGUGUUUCAAGGACUGUCUAACCUGAGAAUGGUGAAACAAAAUGCUCAAUCUCAGGUCCGUCAGCCCAUGAGACGUUCCUUCUAGAGCACCAGGAAAGCA
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Structure
        10          20        30        40        50          
CGGGCAGAUGACAAGCU--|            A  A   UCUA        A  GUGAAAC 
                   GAGGAGUGUUUCA GG CUG    ACCUGAGA UG       \
                   UUCCUUGCAGAGU CC GAC    UGGACUCU AC       A
ACGAAAGGACCACGAGAUC^            A  C   UGCC        A  UCGUAAA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-1388_5p
mirBase accessionMIMAT0039077
Sequence 
0- AGGACUGUCUAACCUGAGAAUG -22
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Star sequence

Pbv-Mir-1388_3p*
mirBase accessionMIMAT0039078
Sequence 
39- AUCUCAGGUCCGUCAGCCCAUG -61
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