MirGeneDB 2.1

MirGeneDB ID

Pbv-Mir-458

Family name MIR-458 (all species)
Seed UAGCUCU
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-458
Paralogues
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mal-Mir-458  Mun-Mir-458  Oan-Mir-458  Spt-Mir-458  Tgu-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE959752.1: 25068-25125 [+]
Precursor
(pre-Mir +30nt flank)
GUCUUCCUGGUGAAUCAUGGUGCAGAUGGCAGCGCCAUUUUCAGAGCUAUAAACAGUAUCAUUGUCAUAGCUCUUUGAAUGGUACUGCCGUAUGUACCGAAAAAGCAGCAUUUAAAUG
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Structure
        10          20        30        40        50        
GUCUUCCUGGUGAAUCA--|      G       CG      UC        AAACAGU 
                   UGGUGCA AUGGCAG  CCAUUU  AGAGCUAU       A
                   GCCAUGU UGCCGUC  GGUAAG  UCUCGAUA       U
GUAAAUUUACGACGAAAAA^      A       AU      UU        CUGUUAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pbv-Mir-458_5p* (predicted)

mirBase accessionNone
Sequence
0- AGCGCCAUUUUCAGAGCUAUAA -22
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Mature sequence

Pbv-Mir-458_3p

mirBase accessionMIMAT0039061
Sequence
36- AUAGCUCUUUGAAUGGUACUGC -58
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