MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-221-P1o1

Family name MIR-221 (all species)
Seed GCUACAU
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-222
Paralogues Pma-Mir-221-P2o1 
Orthologues
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046138.1: 4279200-4279261 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-221-P1o1)		 Mir-221-P2o1 NC_046138.1: 4278405-4278466 [-] UCSC Ensembl
Mir-221-P1o1 NC_046138.1: 4279200-4279261 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGGGCUGCCCCUCGCUGUUGGCACGCGAGACUCAGAGCCCAGUGUAGAUCCUGCCUCGUGCACACAGCAGCUACAUUUGACUACUGGGUCUCUGGUGCCAACCCAUCCAACAACCCCCACU
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Structure
        10          20        30         40        50          
CGGGGCUGCCCCUCGCU--        GC         -| CCC       AUCCUGCCUCG 
                   GUUGGCAC  GAGACUCAG AG   AGUGUAG           \
                   CAACCGUG  CUCUGGGUC UC   UUACAUC           U
UCACCCCCAACAACCUACC        GU         A^ AGU       GACGACACACG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-221-P1o1_5p* (predicted)
mirBase accessionMIMAT0019533
Sequence 
0- ACUCAGAGCCCAGUGUAGAUCC -22
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Mature sequence

Pma-Mir-221-P1o1_3p
mirBase accessionMIMAT0019534
Sequence 
39- AGCUACAUUUGACUACUGGGUCU -62
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