| MirGeneDB ID | Sha-Mir-7281 |
|---|
| Family name |
MIR-7281 (all species) |
|---|
| Seed |
AAUAGGC |
|---|
| Species |
Tasmanian devil (Sarcophilus harrisii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Mdo-Mir-7281
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(DEVIL_add) |
GL856741.1: 166054-166114 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGCUCAGCUCUGCGCUUGGUGCCCUGUACAUAAUAGGCUCUUAGUAAAUGUGUGUUAAAUUGAACAACCAUUUAUGAAGUGCCUAUUAUGUGCAAGUAACCUUUUAAUCAUGUGGCUGGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCUCAGCUCUGCGCUU---| GCCC U A U GUUAAA
GGU UGUACAUAAUAGGC CUU GUAAAUG GU \
CCA ACGUGUAUUAUCCG GAA UAUUUAC CA U
UGGGUCGGUGUACUAAUUUU^ AUGA U G - ACAAGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Sha-Mir-7281_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAAUAGGCUCUUAGUAAAUGUGU -23
Get sequence
|
|---|
| Star sequence |
Sha-Mir-7281_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CAUUUAUGAAGUGCCUAUUAUGU -61
Get sequence
|
|---|
