| MirGeneDB ID | Sha-Mir-7319 |
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| Family name |
MIR-7319 (all species) |
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| Seed |
AAGUUGG |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-7319
Neu-Mir-7319
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL864888.1: 2871889-2871950 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCUCGCUGUGUGACCGUGGGCGAGUCACGCCCCCUCUCUGGGCCUCCUGUUUCCUCAUCUGUAAAAUGGGAAAGUUGGACUAGAGAUGGUGUCUGACUUCCCUCCNNNNNNNNNNNNNNNNN
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCUCGCUGUGUGACCGU---| C C C C G UC G CUCAUCU
GGG GAGUCA GC CC UCUCUGG CC CU UUUC \
CCC UUCAGU UG GG AGAGAUC GG GA AAGG G
NNNNNNNNNNNNNNNNNCCU^ - C U U A UU - GUAAAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Mir-7319_5p* |
| mirBase accession | None |
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| Sequence |
0- CCCCUCUCUGGGCCUCCUGUUUC -23
Get sequence
|
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| Mature sequence |
Sha-Mir-7319_3p |
| mirBase accession | None |
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| Sequence |
40- AAAGUUGGACUAGAGAUGGUGU -62
Get sequence
|
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