MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7319

Family name MIR-7319 (all species)
Seed AAGUUGG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-7319 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL864888.1: 2871889-2871950 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCGCUGUGUGACCGUGGGCGAGUCACGCCCCCUCUCUGGGCCUCCUGUUUCCUCAUCUGUAAAAUGGGAAAGUUGGACUAGAGAUGGUGUCUGACUUCCCUCCNNNNNNNNNNNNNNNNN
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Structure
        10           20        30        40        50        60 
UCUCGCUGUGUGACCGU---|  C      C  C  C       G  UC  G    CUCAUCU 
                    GGG GAGUCA GC CC UCUCUGG CC  CU UUUC       \
                    CCC UUCAGU UG GG AGAGAUC GG  GA AAGG       G
NNNNNNNNNNNNNNNNNCCU^  -      C  U  U       A  UU  -    GUAAAAU 
120       110       100         90        80         70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7319_5p*

mirBase accessionNone
Sequence
0- CCCCUCUCUGGGCCUCCUGUUUC -23
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Mature sequence

Sha-Mir-7319_3p

mirBase accessionNone
Sequence
40- AAAGUUGGACUAGAGAUGGUGU -62
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