| MirGeneDB ID | Sha-Mir-7379 |
|---|
| Family name |
MIR-7379 (all species) |
|---|
| Seed |
CUGGAUG |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Mdo-Mir-7379
Neu-Mir-7379
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(DEVIL_add) |
GL867615.1: 435332-435388 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CCUCAAAGAUUUGUGUUGAGGUAGUUUCUCUAUAUCACCCAUACAUCCAGAUAUAAUUGAAAAAUCUGGAUGCUUUGAUGGUGUAGAGACACUCCUUCAGACAGCAGCUCUGCUGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCUCAAAGAUUUGUGUU--| U U CC UA- AUAAU
GAGG AGU UCUCUAUAUCA CA CAUCCAGAU \
CUUC UCA AGAGAUGUGGU GU GUAGGUCUA U
GAGUCGUCUCGACGACAGA^ C C A- UUC AAAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
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| Star sequence |
Sha-Mir-7379_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UAUAUCACCCAUACAUCCAGAUA -23
Get sequence
|
|---|
| Mature sequence |
Sha-Mir-7379_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
34- UCUGGAUGCUUUGAUGGUGUAGA -57
Get sequence
|
|---|
