| MirGeneDB ID | Spt-Mir-460-P2 |
|---|---|
| Family name | MIR-460 (all species) |
| Seed | CUCAUUG |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-460-P1 |
| Orthologues | Aca-Mir-460-P2 Ami-Mir-460-P2 Cli-Mir-460-P2 Cpi-Mir-460-P2 Dre-Mir-460-P2 Gga-Mir-460-P2 Gja-Mir-460-P2 Gmo-Mir-460-P2 Lch-Mir-460-P2 Loc-Mir-460-P2 Mal-Mir-460-P2 Mun-Mir-460-P2 Tgu-Mir-460-P2 Tni-Mir-460-P2a Tni-Mir-460-P2b Xla-Mir-460-P2c Xla-Mir-460-P2d Xtr-Mir-460-P2 |
| Node of Origin (locus) | Osteichthyes |
| Node of Origin (family) | Osteichthyes |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01011901.1: 29182391-29182448 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUCUAUAAAUAUCCCUGGCUCUAUGUUGUCCUCAUUGUACAUGCUGUGUGUAUUUUUAGAGCGUACACAGCGCAUGCAAUGUGGACAUUGAUGGAGACCAAGAUUCAGCUGGGAGUCGet precursor sequence |
| Structure | 10 20 30 40 50 CAUCUAUAAAUAUCCCU- - GU-| U CA UAUUUU GG CUCUAU UGUCC CAUUGUA UGCUGUGUG \ CC GAGGUA ACAGG GUAACGU GCGACACAU U CUGAGGGUCGACUUAGAA A GUU^ U AC GCGAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Spt-Mir-460-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUCAUUGUACAUGCUGUGUG -21
Get sequence
|
| Star sequence | Spt-Mir-460-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CACAGCGCAUGCAAUGUGGACA -58
Get sequence
|
