MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-2-P10b

Family name MIR-2 (all species)
Seed AAGGAAC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-2944b
Paralogues Tca-Mir-2-P1-v1  Tca-Mir-2-P1-v2  Tca-Mir-2-P2e  Tca-Mir-2-P2f  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2  Tca-Mir-2-P7  Tca-Mir-2-P8  Tca-Mir-2-P10a  Tca-Mir-2-P10c 
Orthologues Asu-Mir-2-o10 
Node of Origin (locus) T. castaneum
Node of Origin (family) Protostomia
Genome context
(Tcas5.2)		 LG5: 7455840-7455901 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P10b)		 Mir-9-o9-v1 LG5: 7455728-7455787 [+] Ensembl
Mir-9-o9-v2 LG5: 7455728-7455788 [+] Ensembl
Mir-2-P10b LG5: 7455840-7455901 [+] Ensembl
Mir-3-P4 LG5: 7455958-7456014 [+] Ensembl
Mir-3893 LG5: 7457235-7457292 [+] Ensembl
Mir-3-P6 LG5: 7457335-7457391 [+] Ensembl
Mir-3-P5 LG5: 7457453-7457508 [+] Ensembl
Mir-36 LG5: 7457551-7457607 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUGAAGACUUCAUUUCGCAUAAUGCAUUUAAGGAACUACAGGUGUGAUGUGUGAUUUCAUUAAACGUAUCACAGCCGUAGUUGCCUUACUGUAUUUGUGAAAUCUCAACAAAAUUCGAAC
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Structure
        10            20        30         40         50          
UUCUGAAGACUUCAUUU----|   U      UU     -      A  -         UGAUUU 
                     CGCA AAUGCA  UAAGG AACUAC GG UGUGAUGUG      \
                     GUGU UUAUGU  AUUCC UUGAUG CC ACACUAUGC      C
CAAGCUUAAAACAACUCUAAA^   -      C-     G      -  G         AAAUUA 
120       110       100          90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-2-P10b_5p
mirBase accessionMIMAT0018746
Sequence 
0- UAAGGAACUACAGGUGUGAUGUG -23
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Co-mature sequence

Tca-Mir-2-P10b_3p
mirBase accessionMIMAT0018747
Sequence 
38- UAUCACAGCCGUAGUUGCCUUACU -62
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