MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-1805

Family name MIR-1805 (all species)
Seed GUAUUGG
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-1805
Paralogues
Orthologues Aca-Mir-1805  Ami-Mir-1805  Cli-Mir-1805  Cpi-Mir-1805  Gga-Mir-1805  Gja-Mir-1805-P3  Gja-Mir-1805-P4  Mdo-Mir-1805  Neu-Mir-1805  Pbv-Mir-1805  Sha-Mir-1805  Spt-Mir-1805  Xla-Mir-1805-P1  Xla-Mir-1805-P2  Xtr-Mir-1805 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(TaeGut1_add)		 1: 81902953-81903013 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGUAAAUGAGAAAGUGGAAUAUUCUGGGAGUUGUAGUCUUUCAAACAGAGCUUCACAAGGACAUACCUGUAUUGGAACACUACAGCUCCCUGAACUUCCUCGCCUCACUGCCUAUGAAA
Get precursor sequence
Structure
        10           20        30        40         50         
GCAGUAAAUGAGAAAGU---|   UA   U            C      -    AGCUUCAC 
                    GGAA  UUC GGGAGUUGUAGU UUUCAA ACAG        A
                    CCUU  AAG CCCUCGACAUCA AAGGUU UGUC        A
AAAGUAUCCGUCACUCCGCU^   C-   U            C      A    CAUACAGG 
 .       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut on the 5p arm -1.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-1805_5p*
mirBase accessionMIMAT0014620
Sequence 
0- AGUUGUAGUCUUUCAAACAGA -21
Get sequence
Mature sequence

Tgu-Mir-1805_3p
mirBase accessionMIMAT0014453
Sequence 
39- UGUAUUGGAACACUACAGCUCC -61
Get sequence