MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-460a
Paralogues Tgu-Mir-460-P2 
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cli-Mir-460-P1  Cpi-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gja-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Loc-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Mun-Mir-460-P1  Neu-Mir-460-P1  Oan-Mir-460-P1  Sha-Mir-460-P1  Spt-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(TaeGut1_add)		 2: 1265309-1265366 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGCUGGGGAGAUUCCUGACUUUAUAGCACCUGCAUUGUACACACUGUGUGUGUGGCUGGAAAUGCACAGCGCAUACAAUGUGGAUUCUGUACAAGUCGCUCACGGCACGGCGGGGC
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Structure
        10         20         30        40        50        
GCUGCUGGGGAGAUUCCU-     -|    CAC UG       CACA      GUGUGG 
                   GACUU UAUAG   C  CAUUGUA    CUGUGU      C
                   CUGAA AUGUC   G  GUAACAU    GACACG      U
CGGGGCGGCACGGCACUCG     C^    UUA GU       ACGC      UAAAGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-460-P1_5p
mirBase accessionMIMAT0014614
Sequence 
0- CCUGCAUUGUACACACUGUGUG -22
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Star sequence

Tgu-Mir-460-P1_3p*
mirBase accessionMIMAT0014658
Sequence 
36- CACAGCGCAUACAAUGUGGAUU -58
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