MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-7133

Family name MIR-7133 (all species)
Seed AGUUUGA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues
Orthologues Dre-Mir-7133  Gmo-Mir-7133  Mal-Mir-7133 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Clupeocephala
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 54516665-54516723 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUGGUCCUGGGACUGGAGGGAUGGCUUGGAUGUUGAGUGUCAAACUGUAUGUUUUGUGGGUUGUAUAGUUUGAUACACAGCACAUGAAGCCAUUUCAUUCACGAGACAGCGAUUUCC
Get precursor sequence
Structure
        10          20         30        40        50        
AAGUGGUCCUGGGACUGGA-- GG       -|GA     A             UGUUUU 
                     G  AUGGCUU G  UGUUG GUGUCAAACUGUA      G
                     C  UACCGAA U  ACGAC CAUAGUUUGAUAU      U
CCUUUAGCGACAGAGCACUUA UU       G^AC     A             GUUGGG 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-7133_5p*
mirBase accessionNone
Sequence 
0- GAUGUUGAGUGUCAAACUGUA -21
Get sequence
Mature sequence

Tni-Mir-7133_3p
mirBase accessionNone
Sequence 
37- UAGUUUGAUACACAGCACAUGA -59
Get sequence