MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-7147

Family name MIR-7147 (all species)
Seed GUACCAU
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues
Orthologues Cpi-Mir-7147  Dre-Mir-7147  Lch-Mir-7147  Loc-Mir-7147  Mal-Mir-7147  Xla-Mir-7147-P1  Xla-Mir-7147-P2  Xtr-Mir-7147 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 6: 5697463-5697520 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCAGCAGCACACAGCGAGCGCCCAGUGCUGUACCAUGCUGGUAGCCAGUGUGUGGUAGGCUUUGCUGGUGACCAGUGUUGUGCCUCACUGGCUGCUCAGUGGAGAACCACUCACUG
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Structure
        10          20        30        40        50        
CUCCAGCAGCACACAGC--|    C      CU    C        A       UGUGG 
                   GAGCG CCAGUG  GUAC AUGCUGGU GCCAGUG     U
                   CUCGU GGUCAC  CGUG UGUGACCA UGGUCGU     A
GUCACUCACCAAGAGGUGA^    C      UC    U        G       UUCGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-7147_5p
mirBase accessionNone
Sequence 
0- UGUACCAUGCUGGUAGCCAGUG -22
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Star sequence

Tni-Mir-7147_3p*
mirBase accessionNone
Sequence 
36- CUGGUGACCAGUGUUGUGCCUC -58
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