Gene name,Ple_firstrun_R1_REcollapsed,Ple_secondrun_R1_REcollapsed,Ple_thirdrun_REcollapsed Ple-Bantam_pri,195976.73,187552.78,146584.19 Ple-Let-7_pri,40863.53,35145.85,284561.59 Ple-Mir-1_pri,1261.65,1104.40,73964.50 Ple-Mir-2_pri,140744.38,150068.21,48682.09 Ple-Mir-10-P2_pri,25513.42,24426.69,59440.56 Ple-Mir-10-P3_pri,22990.12,24816.48,77192.04 Ple-Mir-71_pri,13107.17,12538.17,47337.28 Ple-Mir-12593_pri,320249.53,326577.02,17751.48 Ple-Novel-2_pri,2383.12,1948.94,1882.73 Ple-Novel-3-P1_pri,141865.84,141427.92,46530.39 Ple-Novel-3-P2_pri,141865.84,141427.92,48413.13 Ple-Novel-4_pri,911.19,519.72,0