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mismatches

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References
Tissue	Paper	Accesion
total-animal_cpo_SRR3097338	SRR3097338	http://www.ncbi.nlm.nih.gov/pubmed/26733575
oocyte_cpo_SRX14786361	SRX14786361	https://pubmed.ncbi.nlm.nih.gov/38532500/
oocyte_cpo_SRX14786362	SRX14786362	https://pubmed.ncbi.nlm.nih.gov/38532500/
oocyte_cpo_SRX14786363	SRX14786363	https://pubmed.ncbi.nlm.nih.gov/38532500/
oocyte_cpo_SRX14786364	SRX14786364	https://pubmed.ncbi.nlm.nih.gov/38532500/
whole-juvenile_cpo_SRX1527562	SRX1527562	https://pubmed.ncbi.nlm.nih.gov/26733575/
blood_cpo_SRX8985545	SRX8985545	https://pubmed.ncbi.nlm.nih.gov/33061944/
blood_cpo_SRX8985546	SRX8985546	https://pubmed.ncbi.nlm.nih.gov/33061944/
blood_cpo_SRX8985547	SRX8985547	https://pubmed.ncbi.nlm.nih.gov/33061944/
blood_cpo_SRX8985548	SRX8985548	https://pubmed.ncbi.nlm.nih.gov/33061944/

Cpo-Mir-506-P5

Relative expression

Relative expression

Legend
both truncated	5' elongated	3' elongated	both elongated	5' truncated	3' truncated	canonical
both truncated mismatch	5' elongated mismatch	3' elongated mismatch	both elongated mismatch	5' truncated mismatch	3' truncated mismatch	canonical mismatch

Global results

ratio mature/star: 18.3/0.89 = 20.67

Global results

ratio mature/star: 18.3/0.89 = 20.67
ratio mature (mismatch)/star (mismatch): 0.0/0.0 = None

mature (isoform content): 0.0% (homogeneous)
star (isoform content): 0.0% (homogeneous)

Show details:

total-animal_cpo_SRR3097338

ratio mature/star: 124.0/6.0 = 20.67
ratio mature (mismatch)/star (mismatch): 0.0/0.0 = None

mature (isoform content): 0.0% (homogeneous)
star (isoform content): 0.0% (homogeneous)

total-animal_cpo_SRR3097338

ratio mature/star: 124.0/6.0 = 20.67

Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	G	A	G	U	G	G	C	A	U	U	U	U	C	U	U	G	C	G	A	A	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		2	0.3
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	G	A	G	U	G	G	C	A	U	U	U	U	C	U	U	G	C	G	A	A	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		4	0.59
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	U	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		100	14.76
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		21	3.1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		3	0.44
C	C	A	U	A	U	U	C	A	A	C	C	A	C	U	G	A	G	U	G	U	G	C	A	G	U	G	C	U	U	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	U	G	U	G	U	A	C	U	G	A	A	A	U	A	U	G	A	G	U	G	G	C	A	U	U	U	U	C	U	U	G	C	G	A	A	G	A	G	C	A	A	U	G	U	A	C	A	G	C	A	U	A	U	C	A	U	G	C	U	U	A	U	G	U	G	G	U

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Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	G	A	G	U	G	G	C	A	U	U	U	U	C	U	U	G	C	G	A	A	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		2	0.3
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	G	A	G	U	G	G	C	A	U	U	U	U	C	U	U	G	C	G	A	A	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		4	0.59
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	U	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		100	14.76
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		21	3.1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		3	0.44
C	C	A	U	A	U	U	C	A	A	C	C	A	C	U	G	A	G	U	G	U	G	C	A	G	U	G	C	U	U	U	U	C	A	C	A	A	G	A	A	A	G	U	G	U	C	A	U	U	C	A	U	G	U	G	U	A	C	U	G	A	A	A	U	A	U	G	A	G	U	G	G	C	A	U	U	U	U	C	U	U	G	C	G	A	A	G	A	G	C	A	A	U	G	U	A	C	A	G	C	A	U	A	U	C	A	U	G	C	U	U	A	U	G	U	G	G	U

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