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mismatches

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References
Tissue	Paper	Accesion
female-body-abdominal-segments_cte_SRR16704717	SRR16704717	https://pubmed.ncbi.nlm.nih.gov/35281272/
male-body-abdominal-segments_cte_SRR16704718	SRR16704718	https://pubmed.ncbi.nlm.nih.gov/35281272/
female-head-thoracic-segments_cte_SRR16704719	SRR16704719	https://pubmed.ncbi.nlm.nih.gov/35281272/
male-head-thoracic-segments_cte_SRR16704720	SRR16704720	https://pubmed.ncbi.nlm.nih.gov/35281272/
larva-whole-body_cte_SRR16704721	SRR16704721	https://pubmed.ncbi.nlm.nih.gov/35281272/
late-embryo-gastula_cte_SRR16704722	SRR16704722	https://pubmed.ncbi.nlm.nih.gov/35281272/
early-embryo-2-4-cell-stage_cte_SRR16704723	SRR16704723	https://pubmed.ncbi.nlm.nih.gov/35281272/
total-animal_cte	NA	https://www.ncbi.nlm.nih.gov/pubmed/19196333

Cte-Novel-3-P2

Relative expression

Relative expression

Legend
both truncated	5' elongated	3' elongated	both elongated	5' truncated	3' truncated	canonical
both truncated mismatch	5' elongated mismatch	3' elongated mismatch	both elongated mismatch	5' truncated mismatch	3' truncated mismatch	canonical mismatch

Global results

ratio mature/star: 1.41/0.2 = 7.0

Global results

ratio mature/star: 1.41/0.2 = 7.0
ratio mature (mismatch)/star (mismatch): 0.1/0.0 = None

mature (isoform content): 6.67% (homogeneous)
star (isoform content): 0.0% (homogeneous)

Show details:

female-head-thoracic-segments_cte_SRR16704719

ratio mature/star: 28.0/4.0 = 7.0
ratio mature (mismatch)/star (mismatch): 2.0/0.0 = None

mature (isoform content): 6.67% (homogeneous)
star (isoform content): 0.0% (homogeneous)

female-head-thoracic-segments_cte_SRR16704719

ratio mature/star: 28.0/4.0 = 7.0

Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.05	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		22	1.11	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		5	0.25	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	C	U	G	U	A	U	C	U	U	C	A	C	U	C	G	A	A	U	U	U	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		4	0.2	Cte-Novel-3-P1
U	C	C	A	C	C	G	U	U	G	U	U	G	U	U	C	U	C	G	C	G	U	G	G	A	A	A	U	G	G	A	C	U	G	U	A	U	C	U	U	C	A	C	U	C	G	A	A	U	U	U	C	A	A	A	A	A	A	C	A	A	G	A	A	A	A	G	A	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	A	U	U	U	C	C	A	U	U	G	U	U	U	A	U	A	C	G	U	C	A	G	U	C	A	C	C	G	C	A

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Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.05	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		22	1.11	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		5	0.25	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	C	U	G	U	A	U	C	U	U	C	A	C	U	C	G	A	A	U	U	U	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		4	0.2	Cte-Novel-3-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		2	0.1	Cte-Novel-3-P1
U	C	C	A	C	C	G	U	U	G	U	U	G	U	U	C	U	C	G	C	G	U	G	G	A	A	A	U	G	G	A	C	U	G	U	A	U	C	U	U	C	A	C	U	C	G	A	A	U	U	U	C	A	A	A	A	A	A	C	A	A	G	A	A	A	A	G	A	A	A	U	A	U	G	A	G	U	G	A	A	G	A	U	G	C	A	G	U	C	C	A	U	U	U	C	C	A	U	U	G	U	U	U	A	U	A	C	G	U	C	A	G	U	C	A	C	C	G	C	A

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