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mismatches

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data details

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References
Tissue	Paper	Accesion
milk5_neu_SRR1501600	SRR1501600	https://pubmed.ncbi.nlm.nih.gov/25417092/
milk1_neu_SRR1501601	SRR1501601	https://pubmed.ncbi.nlm.nih.gov/25417092/
milk2_neu_SRR1501602	SRR1501602	https://pubmed.ncbi.nlm.nih.gov/25417092/
milk3_neu_SRR1501603	SRR1501603	https://pubmed.ncbi.nlm.nih.gov/25417092/
milk4_neu_SRR1501604	SRR1501604	https://pubmed.ncbi.nlm.nih.gov/25417092/
serum1_neu_SRR1501605	SRR1501605	https://pubmed.ncbi.nlm.nih.gov/25417092/
serum2_neu_SRR1501606	SRR1501606	https://pubmed.ncbi.nlm.nih.gov/25417092/
cell1_neu_SRR306308	SRR306308	https://pubmed.ncbi.nlm.nih.gov/21854559/
testis1_neu_SRR306309	SRR306309	https://pubmed.ncbi.nlm.nih.gov/21854559/
brain1_neu_SRR306310	SRR306310	https://pubmed.ncbi.nlm.nih.gov/21854559/
fibroblasts1_neu_SRR306311	SRR306311	https://pubmed.ncbi.nlm.nih.gov/21854559/
liver1_neu_SRR306312	SRR306312	https://pubmed.ncbi.nlm.nih.gov/21854559/
ovary1_neu_SRR306313	SRR306313	https://pubmed.ncbi.nlm.nih.gov/21854559/
testis2_neu_SRR306314	SRR306314	https://pubmed.ncbi.nlm.nih.gov/21854559/
testis3_neu_SRR306315	SRR306315	https://pubmed.ncbi.nlm.nih.gov/21854559/

Neu-Mir-128-P2

Relative expression

Relative expression

Legend
both truncated	5' elongated	3' elongated	both elongated	5' truncated	3' truncated	canonical
both truncated mismatch	5' elongated mismatch	3' elongated mismatch	both elongated mismatch	5' truncated mismatch	3' truncated mismatch	canonical mismatch

Global results

ratio mature/star: 158.49/56.76 = 2.79

Global results

ratio mature/star: 158.49/56.76 = 2.79
ratio mature (mismatch)/star (mismatch): 12.9/0.37 = 35.0

mature (isoform content): 7.53% (homogeneous)
star (isoform content): 0.65% (homogeneous)

Show details:

milk2_neu_SRR1501602

ratio mature/star: 430.0/154.0 = 2.79
ratio mature (mismatch)/star (mismatch): 35.0/1.0 = 35.0

mature (isoform content): 7.53% (homogeneous)
star (isoform content): 0.65% (homogeneous)

milk2_neu_SRR1501602

ratio mature/star: 430.0/154.0 = 2.79

Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		337	124.21	Neu-Mir-128-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		93	34.28	Neu-Mir-128-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	A	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		110	40.54
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		44	16.22
U	A	A	U	U	G	G	C	C	U	U	A	U	U	U	G	U	G	A	G	C	U	G	U	U	G	G	A	U	U	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	A	G	A	G	G	U	U	U	A	C	A	U	U	U	C	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	U	U	U	C	A	G	C	U	G	C	U	U	C	C	U	G	G	C	U	U	C	U	U	U	U	U	A	C	U	C	A

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Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		337	124.21	Neu-Mir-128-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		93	34.28	Neu-Mir-128-P1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	A	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		110	40.54
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		44	16.22
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	A	A	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		35	12.9
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.37
U	A	A	U	U	G	G	C	C	U	U	A	U	U	U	G	U	G	A	G	C	U	G	U	U	G	G	A	U	U	C	G	G	G	G	C	C	G	U	A	G	C	A	C	U	G	U	C	U	G	A	G	A	G	G	U	U	U	A	C	A	U	U	U	C	U	C	A	C	A	G	U	G	A	A	C	C	G	G	U	C	U	C	U	U	U	U	U	C	A	G	C	U	G	C	U	U	C	C	U	G	G	C	U	U	C	U	U	U	U	U	A	C	U	C	A

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