reads

mismatches

statistic

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data details

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References
Tissue	Paper	Accesion
ruditapes_rph_SRX18219561	SRX18219561	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX18219562	SRX18219562	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX18219563	SRX18219563	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX18219564	SRX18219564	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX18219565	SRX18219565	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX18219566	SRX18219566	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX18219567	SRX18219567	https://doi.org/10.1016/j.aquatox.2023.106624
ruditapes_rph_SRX1841367	SRX1841367	NA
ruditapes_rph_SRX1841368	SRX1841368	NA
ruditapes_rph_SRX1841369	SRX1841369	NA
ruditapes_rph_SRX1841370	SRX1841370	NA
ruditapes_rph_SRX1841371	SRX1841371	NA
ruditapes_rph_SRX1841372	SRX1841372	NA
ruditapes_rph_SRX4946218	SRX4946218	https://pubmed.ncbi.nlm.nih.gov/33850162/
ruditapes_rph_SRX4946220	SRX4946220	https://pubmed.ncbi.nlm.nih.gov/33850162/

Rph-Mir-375-P17d

Relative expression

Relative expression

Legend
both truncated	5' elongated	3' elongated	both elongated	5' truncated	3' truncated	canonical
both truncated mismatch	5' elongated mismatch	3' elongated mismatch	both elongated mismatch	5' truncated mismatch	3' truncated mismatch	canonical mismatch

Global results

ratio mature/star: 2.87/0.0 = None

Global results

ratio mature/star: 2.87/0.0 = None
ratio mature (mismatch)/star (mismatch): 0.15/0.0 = None

mature (isoform content): 5.0% (homogeneous)
star (isoform content): None

Show details:

ruditapes_rph_SRX4946218

ratio mature/star: 19.0/0.0 = None
ratio mature (mismatch)/star (mismatch): 1.0/0.0 = None

mature (isoform content): 5.0% (homogeneous)
star (isoform content): None

ruditapes_rph_SRX4946218

ratio mature/star: 19.0/0.0 = None

Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	U	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		13	1.96	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		5	0.76	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.15	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
U	G	G	U	A	U	A	U	A	U	G	G	A	G	A	A	U	A	U	A	U	U	G	U	C	A	A	C	U	G	A	C	G	C	U	U	G	C	C	A	U	U	U	G	U	A	A	C	A	A	G	G	C	G	U	A	U	U	A	A	A	U	C	C	A	G	U	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	U	A	U	C	A	C	G	A	C	A	A	A	C	A	U	A	U	C	U	A	C	U	A	C	C	A	C	A	A	G	G	A

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Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	U	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		13	1.96	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		5	0.76	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.15	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.15	Rph-Mir-375-P17a, Rph-Mir-375-P17b, ...
U	G	G	U	A	U	A	U	A	U	G	G	A	G	A	A	U	A	U	A	U	U	G	U	C	A	A	C	U	G	A	C	G	C	U	U	G	C	C	A	U	U	U	G	U	A	A	C	A	A	G	G	C	G	U	A	U	U	A	A	A	U	C	C	A	G	U	U	U	U	G	U	U	C	A	U	U	C	G	G	C	U	C	G	C	G	U	U	A	U	C	A	C	G	A	C	A	A	A	C	A	U	A	U	C	U	A	C	U	A	C	C	A	C	A	A	G	G	A

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