MirGeneDB 3.0

18 Branchiostoma lanceolatum microRNA genes with seed UACGGGG (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ad Ad Em Em Em Em
Bla-Mir-4872-P1 None MIR-4872 UACGGGG None None Sc0000763 536 594 + B. lanceolatum Branchiostoma No 1
Bla-Mir-4872-P2 None MIR-4872 UACGGGG None None Sc0000763 814 872 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P5 None MIR-4872 UACGGGG None None Sc0000763 3908 3966 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P6a None MIR-4872 UACGGGG None None Sc0000763 4209 4267 + B. lanceolatum Branchiostoma Unknown 1 1
Bla-Mir-4872-P6b None MIR-4872 UACGGGG None None Sc0000763 9162 9220 + B. lanceolatum Branchiostoma Unknown 1 1
Bla-Mir-4872-P6c None MIR-4872 UACGGGG None None Sc0000044 1564104 1564162 - B. lanceolatum Branchiostoma Unknown 1 1
Bla-Mir-4872-P14a None MIR-4872 UACGGGG None None Sc0000763 11768 11826 + B. lanceolatum Branchiostoma No
Bla-Mir-4872-P14b None MIR-4872 UACGGGG None None Sc0000044 1561476 1561534 - B. lanceolatum Branchiostoma No
Bla-Mir-4872-P21 None MIR-4872 UACGGGG None None Sc0000044 1586185 1586243 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P22a None MIR-4872 UACGGGG None None Sc0000044 1585913 1585971 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P22b None MIR-4872 UACGGGG None None Sc0000044 1583822 1583880 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P22c None MIR-4872 UACGGGG None None Sc0000044 1583521 1583579 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P23 None MIR-4872 UACGGGG None None Sc0000044 1585615 1585673 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P24 None MIR-4872 UACGGGG None None Sc0000044 1585024 1585082 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P25a None MIR-4872 UACGGGG None None Sc0000044 1582296 1582354 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P25b None MIR-4872 UACGGGG None None Sc0000044 1578704 1578762 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P25c None MIR-4872 UACGGGG None None Sc0000044 1571338 1571396 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P27 None MIR-4872 UACGGGG None None Sc0000044 1574777 1574835 - B. lanceolatum Branchiostoma Unknown

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix