| MirGeneDB ID | Aca-Mir-5426 |
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| Family name |
MIR-5426 (all species) |
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| Seed |
ACUCUAA |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-5426
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. carolinensis
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| Node of Origin (family) |
A. carolinensis
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Genome context
(anoCar2) |
3: 195203204-195203265 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCAUACUACACUAAUUCAGCAGUGCAGAUGCACUCUAAGUCUACUUCCACAGUCUUCACUUCAUGCAUCUGAGGAAGUAAACUUGGACUACAAAUGCAUACGCUACCAACUUCAUUCUCUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCAUACUACACUAAUUC- A-| GA CAC C A UCUUCAC
AGC GUGCA UG UCUAAGU UACUUCC CAG U
UCG UACGU AC AGGUUCA AUGAAGG GUC U
GUUCUCUUACUUCAACCA CA^ AA AUC A A UACGUAC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Aca-Mir-5426_5p |
| mirBase accession | MIMAT0022046 |
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| Sequence |
0- CACUCUAAGUCUACUUCCACAG -22
Get sequence
|
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| Co-mature sequence |
Aca-Mir-5426_3p |
| mirBase accession | MIMAT0022047 |
|---|
| Sequence |
40- GAGGAAGUAAACUUGGACUACA -62
Get sequence
|
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