MirGeneDB 3.0

MirGeneDB ID

Aca-Mir-9576

Family name MIR-9576 (all species)
Seed UUUUAUA
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-9576
Paralogues
Orthologues
Node of Origin (locus) A. carolinensis
Node of Origin (family) A. carolinensis
Genome context
(anoCar2)
GL343418.1: 621266-621323 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCUAUGAAUAGAUGCCAUCCCAGGUUCCUUCUACACUGCCAUAUAAUCCAGAUUAUCUGUUUUGAUUUUAUAUGGCAAUGUAGAGGAAGGUUUCUUUUCCCACCACGACCCCUUUC
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Structure
        10        20             30        40        50         
UUUCUAUGAAUAGAUGCCAUC-----| AGG     U     C          UCCAGAUUAU 
                          CC   UUCCU CUACA UGCCAUAUAA          \
                          GG   AAGGA GAUGU ACGGUAUAUU          C
CUUUCCCCAGCACCACCCUUUUCUUU^ ---     -     A          UUAGUUUUGU 
      110       100           90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-9576_5p*

mirBase accessionMIMAT0037586
Sequence
0- UUCUACACUGCCAUAUAAUCCA -22
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Mature sequence

Aca-Mir-9576_3p

mirBase accessionMIMAT0037587
Sequence
36- AUUUUAUAUGGCAAUGUAGAGG -58
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