MirGeneDB 3.0

MirGeneDB ID

Adi-Novel-1

Family name ADI-NOVEL-1 (all species)
Seed UCCUGAA
Species Stony coral (Acropora digitifera)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) A. digitifera
Node of Origin (family) A. digitifera
Genome context
(GCA_000222465.2_Adig_1.1_genomic)
DF971053.1: 27592-27645 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUUGUACAUGUUACAUCUUUGAUGGAAAAUGCGCAAGAGCAGUCAAGACUGUUUAUUCAUUCCUGAAAGCUCUUGUGAAUAUUCCUUCACAGAAACACAACCGAUAAUGUAA
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Structure
        10          20        30        40        50      
UUCUUGUACAUGUUACA--|  U   U    A  G         AG   A  C  UU 
                   UCU UGA GGAA AU CGCAAGAGC  UCA GA UG  U
                   AGA ACU CCUU UA GUGUUCUCG  AGU CU AC  A
AAUGUAAUAGCCAACACAA^  C   U    A  A         AA   C  U  UU 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Adi-Novel-1_5p*

mirBase accessionNone
Sequence
0- AUGCGCAAGAGCAGUCAAGACUG -23
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Mature sequence

Adi-Novel-1_3p

mirBase accessionNone
Sequence
31- UUCCUGAAAGCUCUUGUGAAUAU -54
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