MirGeneDB ID | Adi-Novel-1 |
Family name |
ADI-NOVEL-1 (all species) |
Seed |
UCCUGAA |
Species |
Stony coral (Acropora digitifera) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
A. digitifera
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Node of Origin (family) |
A. digitifera
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Genome context (GCA_000222465.2_Adig_1.1_genomic) |
DF971053.1: 27592-27645 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
UUCUUGUACAUGUUACAUCUUUGAUGGAAAAUGCGCAAGAGCAGUCAAGACUGUUUAUUCAUUCCUGAAAGCUCUUGUGAAUAUUCCUUCACAGAAACACAACCGAUAAUGUAA
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCUUGUACAUGUUACA--| U U A G AG A C UU
UCU UGA GGAA AU CGCAAGAGC UCA GA UG U
AGA ACU CCUU UA GUGUUCUCG AGU CU AC A
AAUGUAAUAGCCAACACAA^ C U A A AA C U UU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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Star sequence |
Adi-Novel-1_5p* |
mirBase accession | None |
Sequence |
0- AUGCGCAAGAGCAGUCAAGACUG -23
Get sequence
|
Mature sequence |
Adi-Novel-1_3p |
mirBase accession | None |
Sequence |
31- UUCCUGAAAGCUCUUGUGAAUAU -54
Get sequence
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