| MirGeneDB ID | Adi-Novel-10 |
|---|
| Family name |
ADI-NOVEL-10 (all species) |
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| Seed |
ACUGAAA |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. digitifera
|
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| Node of Origin (family) |
A. digitifera
|
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF971008.1: 28740-28790 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAAGUUUUGUCCAGGAGUGCAAGUAAUGCAAACUGAAAUAUGCAUGCAUCUAAUUAUUAGAUGCAAGCAUAUUUCAGUUUGCAUCACUGUUCCCUCACUCUUUGUCUCAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAAGUUUUGUCCAGGAGU---| A A A AU
GCA GU AUGCAAACUGAAAUAUGC UGCAUCUA \
UGU CA UACGUUUGACUUUAUACG ACGUAGAU U
CAACUCUGUUUCUCACUCCCU^ - C A UA
. 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
| |
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| Mature sequence |
Adi-Novel-10_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACUGAAAUAUGCAUGCAUCUA -22
Get sequence
|
|---|
| Star sequence |
Adi-Novel-10_3p* |
| mirBase accession | None |
|---|
| Sequence |
29- GAUGCAAGCAUAUUUCAGUUUG -51
Get sequence
|
|---|
