MirGeneDB ID | Adi-Novel-12 |
Family name |
ADI-NOVEL-12 (all species) |
Seed |
AUUGAAA |
Species |
Stony coral (Acropora digitifera) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
A. digitifera
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Node of Origin (family) |
A. digitifera
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Genome context (GCA_000222465.2_Adig_1.1_genomic) |
DF971327.1: 148689-148740 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
AGUGGAAGAUAGUCUAUAGCAGUUAUUUUGUACUCAAUCUUGUUUUAAUAAAUUUAUUAUUAUUGAAAUAAGAUUGGAUAUAAAAUUGAAGGAACACUCAGUUUGCAAGCAA
Get precursor sequence
|
Structure | 10 20 30 40 50
AGUGGAAGAUAGUCUAUAGCAGUU--| CU AUU
AUUUUGUA CAAUCUUGUUUUAAUAA U
UAAAAUAU GUUAGAAUAAAGUUAUU A
AACGAACGUUUGACUCACAAGGAAGU^ AG AUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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Star sequence |
Adi-Novel-12_5p* |
mirBase accession | None |
Sequence |
0- UACUCAAUCUUGUUUUAAUAAA -22
Get sequence
|
Mature sequence |
Adi-Novel-12_3p |
mirBase accession | None |
Sequence |
30- UAUUGAAAUAAGAUUGGAUAUA -52
Get sequence
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