MirGeneDB ID | Adi-Novel-3 |
Family name |
ADI-NOVEL-3 (all species) |
Seed |
CUGGCAG |
Species |
Stony coral (Acropora digitifera) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
A. digitifera
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Node of Origin (family) |
A. digitifera
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Genome context (GCA_000222465.2_Adig_1.1_genomic) |
DF971078.1: 281301-281354 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CGUGAAGGACAGCAAAGUGAAUACAGAAUAGGAAUGUAAGAUACUGCCAUGCAUUUAGUGUCUGGCAGUAUGUUAUUUUUCCAAUUUAGUAUUCAAAUUUUAAUCCCAUGAUUA
Get precursor sequence
|
Structure | 10 20 30 40 50
CGUGAAGGACAGCAAAG-- A A U-| G U UU
UGAAUAC GAAU GGAA GUAA AUACUGCCA GCA \
ACUUAUG UUUA CCUU UAUU UAUGACGGU UGU U
AUUAGUACCCUAAUUUUAA A A UU^ G C GA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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Star sequence |
Adi-Novel-3_5p* |
mirBase accession | None |
Sequence |
0- GGAAUGUAAGAUACUGCCAUGCA -23
Get sequence
|
Mature sequence |
Adi-Novel-3_3p |
mirBase accession | None |
Sequence |
30- UCUGGCAGUAUGUUAUUUUUCCAA -54
Get sequence
|