MirGeneDB 3.0

MirGeneDB ID

Adi-Novel-3

Family name ADI-NOVEL-3 (all species)
Seed CUGGCAG
Species Stony coral (Acropora digitifera)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) A. digitifera
Node of Origin (family) A. digitifera
Genome context
(GCA_000222465.2_Adig_1.1_genomic)
DF971078.1: 281301-281354 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGAAGGACAGCAAAGUGAAUACAGAAUAGGAAUGUAAGAUACUGCCAUGCAUUUAGUGUCUGGCAGUAUGUUAUUUUUCCAAUUUAGUAUUCAAAUUUUAAUCCCAUGAUUA
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Structure
        10          20        30         40        50      
CGUGAAGGACAGCAAAG--       A    A    U-|   G         U   UU 
                   UGAAUAC GAAU GGAA  GUAA AUACUGCCA GCA  \
                   ACUUAUG UUUA CCUU  UAUU UAUGACGGU UGU  U
AUUAGUACCCUAAUUUUAA       A    A    UU^   G         C   GA 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Adi-Novel-3_5p*

mirBase accessionNone
Sequence
0- GGAAUGUAAGAUACUGCCAUGCA -23
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Mature sequence

Adi-Novel-3_3p

mirBase accessionNone
Sequence
30- UCUGGCAGUAUGUUAUUUUUCCAA -54
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